STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORA28799.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (256 aa)    
Predicted Functional Partners:
ORA38199.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.715
ORA38768.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.700
ORA27293.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.625
ORA28795.1
Competence/damage-inducible protein A; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family.
    
 0.599
ORA38639.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.562
ORA23602.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.562
ORA28753.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.555
nadE
NAD(+) synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.533
ORA35915.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.460
ORA32864.1
MBL fold metallo-hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.460
Your Current Organism:
Mycobacterium aquaticum
NCBI taxonomy Id: 1927124
Other names: CIP 111198, DSM 104277, M. aquaticum, Mycobacterium aquaticum Shahraki et al. 2017, Mycobacterium sp. RW6, strain RW6
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.