STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_001074Eukaryotic translation initiation factor 4A isoform 1B; Belongs to the DEAD box helicase family. (419 aa)    
Predicted Functional Partners:
CAOG_009132
Eukaryotic translation initiation factor 3 subunit B; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
   
 
 0.958
CAOG_003235
Eukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
   
 
 0.955
CAOG_007781
Eukaryotic initiation factor iso4E; Belongs to the eukaryotic initiation factor 4E family.
   
 0.954
CAOG_000865
RRM domain-containing protein.
   
 0.953
CAOG_004174
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.953
CAOG_007072
Guanine nucleotide-binding protein.
   
 
 0.952
CAOG_002464
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
 
 
 0.936
CAOG_004898
Eukaryotic translation initiation factor 4 gamma subunit.
   
 0.934
CAOG_007037
Uncharacterized protein.
   
 0.934
CAOG_002302
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
 
 
 0.925
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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