STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI34835.1Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domain. (79 aa)    
Predicted Functional Partners:
SHJ41710.1
Cysteine desulfurase.
  
 0.839
SHI34869.1
ATP-binding protein involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
     
 0.827
SHI52385.1
Succinate dehydrogenase / fumarate reductase iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
  
 
 0.723
SHI52820.1
Iron-sulfur cluster assembly protein; Belongs to the HesB/IscA family.
  
 
 0.720
SHJ73217.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
     
 0.637
SHI34800.1
Thioredoxin reductase (NADPH).
  
  
 0.632
SHJ60037.1
Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domain.
  
     0.624
SHI67127.1
4Fe-4S binding domain-containing protein.
   
  
 0.574
SHI90672.1
4Fe-4S dicluster domain-containing protein.
   
  
 0.574
SHI45185.1
Dihydroxyacid dehydratase; Belongs to the IlvD/Edd family.
   
 
 0.537
Your Current Organism:
Pseudozobellia thermophila
NCBI taxonomy Id: 192903
Other names: Costertonia sp. KCTC 22017, DSM 19858, JCM 11733, KCTC 22016, KMM 3531, P. thermophila, Pseudozobellia thermophila Nedashkovskaya et al. 2009, Zobellia sp. KMM 3531
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