STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI61996.1Flavodoxin. (308 aa)    
Predicted Functional Partners:
SHI61954.1
3-oxoacyl-[acyl-carrier-protein] synthase-3.
 
  
 0.961
SHI61866.1
Predicted 3-hydroxylacyl-ACP dehydratase, HotDog domain.
 
     0.951
SHI61914.1
Predicted 3-hydroxylacyl-ACP dehydratase, HotDog domain.
 
    0.946
SHI62030.1
Predicted acyltransferase, LPLAT superfamily.
 
     0.939
SHI61800.1
Butirosin biosynthesis protein H, N-terminal.
 
     0.904
SHI61832.1
Hypothetical protein.
 
     0.904
SHI61723.1
ABC-2 type transport system permease protein.
 
     0.903
SHI61758.1
ABC-2 type transport system ATP-binding protein.
 
     0.888
SHI61169.1
Hypothetical protein.
 
   
 0.857
SHI61565.1
Hypothetical protein.
 
    0.856
Your Current Organism:
Pseudozobellia thermophila
NCBI taxonomy Id: 192903
Other names: Costertonia sp. KCTC 22017, DSM 19858, JCM 11733, KCTC 22016, KMM 3531, P. thermophila, Pseudozobellia thermophila Nedashkovskaya et al. 2009, Zobellia sp. KMM 3531
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.