STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ39706.1Cytochrome c, mono-and diheme variants. (132 aa)    
Predicted Functional Partners:
SHJ66914.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
 
 0.999
SHJ39671.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
  
  0.950
SHJ58732.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor.
 
 
 0.885
SHI67155.1
Pyridine nucleotide-disulphide oxidoreductase.
   
 0.863
SHI83287.1
Sulfide:quinone oxidoreductase.
   
 0.863
SHJ09325.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit.
   
 0.863
SHJ10795.1
Dissimilatory nitrite reductase (NO-forming), copper type apoprotein.
 
 
0.840
SHJ84118.1
Putative membrane-bound dehydrogenase domain-containing protein.
    
  0.823
SHI47794.1
Quinoprotein glucose dehydrogenase.
  
 
 0.808
SHJ92244.1
FAD/FMN-containing dehydrogenase.
    
 0.757
Your Current Organism:
Pseudozobellia thermophila
NCBI taxonomy Id: 192903
Other names: Costertonia sp. KCTC 22017, DSM 19858, JCM 11733, KCTC 22016, KMM 3531, P. thermophila, Pseudozobellia thermophila Nedashkovskaya et al. 2009, Zobellia sp. KMM 3531
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