STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ94849.1Planctomycete cytochrome C. (911 aa)    
Predicted Functional Partners:
SHJ66914.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
  
 0.998
SHJ58732.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor.
  
 0.993
SHJ94815.1
Protein of unknown function.
 
     0.946
SHJ73217.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.888
SHJ81645.1
Hypothetical protein.
 
  0.888
SHJ09494.1
Hypothetical protein.
 
  0.885
SHJ94783.1
Sugar phosphate isomerase/epimerase.
 
  
  0.882
SHJ23730.1
Rieske [2Fe-2S] domain-containing protein.
  
 0.800
SHJ94761.1
Leucine rich repeat-containing protein.
 
    
0.793
SHJ88153.1
Cytochrome c.
 
 
 0.791
Your Current Organism:
Pseudozobellia thermophila
NCBI taxonomy Id: 192903
Other names: Costertonia sp. KCTC 22017, DSM 19858, JCM 11733, KCTC 22016, KMM 3531, P. thermophila, Pseudozobellia thermophila Nedashkovskaya et al. 2009, Zobellia sp. KMM 3531
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