STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK00165.1Acyl-CoA dehydrogenase. (383 aa)    
Predicted Functional Partners:
SHJ76949.1
Electron transfer flavoprotein alpha subunit apoprotein.
 0.994
SHI97939.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.979
SHJ37693.1
Amino acid adenylation domain-containing protein.
 
 
 0.968
SHJ76972.1
Electron transfer flavoprotein beta subunit.
 
 0.956
SHI54098.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  0.928
SHJ08300.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  0.922
SHJ73217.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.918
SHJ68948.1
Acetyl-CoA carboxylase, carboxyltransferase component.
 
 0.878
SHI97969.1
acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.877
SHJ11760.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.870
Your Current Organism:
Pseudozobellia thermophila
NCBI taxonomy Id: 192903
Other names: Costertonia sp. KCTC 22017, DSM 19858, JCM 11733, KCTC 22016, KMM 3531, P. thermophila, Pseudozobellia thermophila Nedashkovskaya et al. 2009, Zobellia sp. KMM 3531
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