STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN13587.1Hypothetical protein. (296 aa)    
Predicted Functional Partners:
SDL85175.1
WD40-like Beta Propeller Repeat.
  
  0.642
SDN09487.1
Hypothetical protein.
  
     0.513
SDL24667.1
5-carboxymethyl-2-hydroxymuconate isomerase.
  
     0.509
SDM98046.1
Hypothetical protein.
    
 
 0.484
SDL23823.1
Outer membrane protein OmpA.
   
  0.469
SDL38780.1
Outer membrane protein beta-barrel domain-containing protein.
   
  0.469
SDL40408.1
Outer membrane protein OmpA.
   
  0.469
SDL47116.1
Outer membrane protein OmpA.
   
  0.469
SDL63469.1
Thrombospondin type 3 repeat-containing protein.
   
  0.469
SDM09892.1
WD40-like Beta Propeller Repeat.
   
  0.469
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.