STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOO03077.1Hypothetical protein. (509 aa)    
Predicted Functional Partners:
OOO03078.1
Hypothetical protein.
 
 
 
 0.946
OOO03036.1
Peptidyl-prolyl cis-trans isomerase cyp18; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 
 0.810
rpsK
30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.
   
  0.660
aarA
Citrate synthase; Belongs to the citrate synthase family.
    
   0.658
prpC
2-methylcitrate synthase; Belongs to the citrate synthase family.
    
   0.658
OOO02846.1
Hypothetical protein.
   
 
 0.644
OOO02317.1
Hypothetical protein.
  
 
 0.603
OOO03429.1
Hypothetical protein.
   
 
 0.550
OOO01708.1
Hypothetical protein.
   
 
 0.550
dsbE
Thiol:disulfide interchange protein DsbE.
    
 0.544
Your Current Organism:
Chromatiales bacterium USCgTaylor
NCBI taxonomy Id: 1934255
Other names: C. bacterium USCg_Taylor, Chromatiales bacterium USCg_Taylor
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.