STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002011075_00318Unannotated protein. (590 aa)    
Predicted Functional Partners:
GCA_002011075_00804
Unannotated protein.
  
 
 0.999
GCA_002011075_01052
Unannotated protein.
   
   0.994
GCA_002011075_01055
Unannotated protein.
   
   0.994
GCA_002011075_00936
Unannotated protein.
   
 
 0.993
GCA_002011075_01064
Unannotated protein.
  
   0.992
GCA_002011075_01026
Unannotated protein.
  
 
 0.988
GCA_002011075_00942
Unannotated protein.
  
   0.987
GCA_002011075_00306
Unannotated protein.
   
   0.985
GCA_002011075_00656
Unannotated protein.
   
 
 0.985
GCA_002011075_00880
Unannotated protein.
 
   0.985
Your Current Organism:
Geothermarchaeota archaeon
NCBI taxonomy Id: 1935120
Other names: C. Geothermarchaeota archaeon JdFR-13, Candidatus Geothermarchaeota archaeon JdFR-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.