STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002011615_01007Unannotated protein. (327 aa)    
Predicted Functional Partners:
GCA_002011615_00492
Unannotated protein.
    
  0.750
GCA_002011615_00489
Unannotated protein.
  
 
 0.694
GCA_002011615_01035
Unannotated protein.
  
 0.658
GCA_002011615_01010
Unannotated protein.
  
 
 0.599
GCA_002011615_01338
Unannotated protein.
  
 
 0.599
GCA_002011615_00559
Unannotated protein.
  
 
 0.577
GCA_002011615_01008
Unannotated protein.
       0.563
GCA_002011615_01750
Unannotated protein.
   
 
 0.544
GCA_002011615_00353
Unannotated protein.
   
 0.470
GCA_002011615_01265
Unannotated protein.
   
 0.470
Your Current Organism:
Hydrothermae bacterium JdFR72
NCBI taxonomy Id: 1935123
Other names: C. Hydrothermae bacterium JdFR-72, Candidatus Hydrothermae bacterium JdFR-72
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.