STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
perR_2Oxidative stress genes repressor; Belongs to the Fur family. (140 aa)    
Predicted Functional Partners:
fur
Ferric uptake regulation protein; Belongs to the Fur family.
  
     0.763
rbr
Rubrerythrin.
  
  
 0.758
tpx
Putative thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
  
  
 0.603
rd
Rubredoxin.
  
  
 0.577
AQT69503.1
Protein TolR.
     
 0.488
exbB_4
Biopolymer transport protein ExbB.
     
 0.487
perR_1
Peroxide operon regulator; Belongs to the Fur family.
  
     0.483
AQT69500.1
Hypothetical protein.
       0.482
AQT69501.1
Hypothetical protein.
       0.482
AQT69502.1
Anaphase-promoting complex, cyclosome, subunit 3.
       0.482
Your Current Organism:
Anaerohalosphaera lusitana
NCBI taxonomy Id: 1936003
Other names: A. lusitana, Anaerohalosphaera lusitana Pradel et al., DSM 103484, JCM 31926, KCTC 15600, Phycisphaerae bacterium ST-NAGAB-D1, strain ST-NAGAB-D1
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