STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOV19187.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (170 aa)    
Predicted Functional Partners:
OOV19186.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.938
OOV19188.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.909
OOV20742.1
Type VI secretion system contractile sheath protein TssC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.870
OOV19191.1
Lysozyme; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.834
OOV19179.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.824
OOV19178.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.823
OOV19176.1
PKD domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.813
OOV19192.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.813
OOV19193.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.805
OOV19194.1
Type IV secretion protein Rhs; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.797
Your Current Organism:
Flavobacterium sp. LM4
NCBI taxonomy Id: 1938609
Other names: F. sp. LM4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.