STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DENND4CDENN domain-containing protein 4C isoform X1. (1931 aa)    
Predicted Functional Partners:
ANKFY1
Rabankyrin-5.
     
 0.924
VPS35
Vacuolar protein sorting-associated protein 35.
    
  0.848
VPS29
Vacuolar protein sorting-associated protein 29.
    
  0.847
SNX2
Sorting nexin-1/2.
     
 0.846
RAB7A
Ras-related protein Rab-7A.
    
 0.838
MVB12B
Multivesicular body subunit 12B.
     
 0.692
DENND5A
DENN domain-containing protein 5A isoform X1.
    
0.621
DENND5B
DENN domain-containing protein 5B isoform X1.
    
0.621
WHAMM
WASP homolog-associated protein with actin, membranes and microtubules.
      
 0.537
MINDY2
Ubiquitin carboxyl-terminal hydrolase MINDY-1/2.
      
 0.465
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.