Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CT0344 | CT0345 | CT0344 | CT0345 | Conserved hypothetical protein. | Identified by match to protein family HMM PF00881. | 0.773 |
| CT0344 | CT0347 | CT0344 | CT0347 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.619 |
| CT0344 | PhhB | CT0344 | CT0342 | Conserved hypothetical protein. | Pterin-4-alpha-carbinolamine dehydratase; Identified by similarity to EGAD:21838; match to protein family HMM PF01329. | 0.455 |
| CT0344 | aat | CT0344 | CT0346 | Conserved hypothetical protein. | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.762 |
| CT0344 | uvrD | CT0344 | CT0343 | Conserved hypothetical protein. | DNA helicase II; Identified by similarity to EGAD:14237; match to protein family HMM PF00580. | 0.648 |
| CT0345 | CT0344 | CT0345 | CT0344 | Identified by match to protein family HMM PF00881. | Conserved hypothetical protein. | 0.773 |
| CT0345 | CT0347 | CT0345 | CT0347 | Identified by match to protein family HMM PF00881. | Hypothetical protein; Identified by Glimmer2; putative. | 0.619 |
| CT0345 | PhhB | CT0345 | CT0342 | Identified by match to protein family HMM PF00881. | Pterin-4-alpha-carbinolamine dehydratase; Identified by similarity to EGAD:21838; match to protein family HMM PF01329. | 0.465 |
| CT0345 | aat | CT0345 | CT0346 | Identified by match to protein family HMM PF00881. | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.762 |
| CT0345 | uvrD | CT0345 | CT0343 | Identified by match to protein family HMM PF00881. | DNA helicase II; Identified by similarity to EGAD:14237; match to protein family HMM PF00580. | 0.649 |
| CT0347 | CT0344 | CT0347 | CT0344 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.619 |
| CT0347 | CT0345 | CT0347 | CT0345 | Hypothetical protein; Identified by Glimmer2; putative. | Identified by match to protein family HMM PF00881. | 0.619 |
| CT0347 | CT0348 | CT0347 | CT0348 | Hypothetical protein; Identified by Glimmer2; putative. | Identified by match to protein family HMM PF02374; match to protein family HMM TIGR00345. | 0.483 |
| CT0347 | CT0349 | CT0347 | CT0349 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.483 |
| CT0347 | aat | CT0347 | CT0346 | Hypothetical protein; Identified by Glimmer2; putative. | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.628 |
| CT0347 | uvrD | CT0347 | CT0343 | Hypothetical protein; Identified by Glimmer2; putative. | DNA helicase II; Identified by similarity to EGAD:14237; match to protein family HMM PF00580. | 0.524 |
| CT0348 | CT0347 | CT0348 | CT0347 | Identified by match to protein family HMM PF02374; match to protein family HMM TIGR00345. | Hypothetical protein; Identified by Glimmer2; putative. | 0.483 |
| CT0348 | CT0349 | CT0348 | CT0349 | Identified by match to protein family HMM PF02374; match to protein family HMM TIGR00345. | Hypothetical protein; Identified by Glimmer2; putative. | 0.773 |
| CT0348 | aat | CT0348 | CT0346 | Identified by match to protein family HMM PF02374; match to protein family HMM TIGR00345. | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.409 |
| CT0349 | CT0347 | CT0349 | CT0347 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.483 |
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