STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CT0951Alcohol dehydrogenase, iron-containing; Identified by match to protein family HMM PF00465. (383 aa)    
Predicted Functional Partners:
CT0950
Conserved hypothetical protein; Identified by similarity to GP:5458684; match to protein family HMM PF02001; Belongs to the UPF0251 family.
       0.701
CT1275
Alcohol dehydrogenase, zinc-containing; Identified by similarity to GP:2708273.
  
 
 0.645
nifJ
Pyruvate flavodoxin/ferrodoxin oxidoreductase; Identified by similarity to EGAD:9985; match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM PF02775; match to protein family HMM TIGR02176.
  
  
 0.640
CT2022
Pyruvate-formate-lyase-activating enzyme, putative; Identified by similarity to EGAD:107008; match to protein family HMM PF04055.
 
  
 0.594
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.557
CT1573
Identified by match to protein family HMM PF00171.
 
 
 0.456
CT0949
Hypothetical protein; Identified by Glimmer2; putative.
       0.414
Your Current Organism:
Chlorobaculum tepidum
NCBI taxonomy Id: 194439
Other names: C. tepidum TLS, Chlorobaculum tepidum TLS, Chlorobium tepidum TLS
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