STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM45265.1Protein of unknown function. (135 aa)    
Predicted Functional Partners:
SFM45280.1
Uncharacterized damage-inducible protein DinB (forms a four-helix bundle).
 
     0.760
SFM45292.1
Predicted deacylase.
 
     0.704
SFM35107.1
Protein of unknown function DUF302.
  
     0.533
SFM45251.1
Hypothetical protein.
       0.508
SFM39172.1
Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor.
  
     0.407
SFM62181.1
Uncharacterized membrane protein.
  
     0.406
Your Current Organism:
Ectothiorhodospira mobilis
NCBI taxonomy Id: 195064
Other names: ATCC 49921, DSM 237, DSM 4180 [[Ectothiorhodospira marismortui]], E. mobilis, Ectothiorhodospira marismortui, Ectothiorhodospira mobile, NBRC 103802, strain EG-1 [[Ectothiorhodospira marismortui]], strain Trueper 8112, strain Truper 8112
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