STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPE2074Conserved hypothetical protein; Involved in the fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon-carbon double bond in an enoyl moiety that is covalently linked to a coenzyme A (CoA); Belongs to the TER reductase family. (389 aa)    
Predicted Functional Partners:
fabZ
Hydroxymyristoyl-[acyl carrier protein] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.
  
 
 0.936
fabF
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
  
 
 0.934
acdS
378 aa, similar to sp:ACDS_CLOAB ACYL-COA DEHYDROGENASE, SHORT-CHAIN SPECIFIC (EC 1.3.99.2) (SCAD) (BUTYRYL-COA DEHYDROGENASE) from Clostridium acetobutylicum (379 aa); 58.5% identity in 378 aa overlap. 1 putative transmembrane region was found by PSORT; CPE0097.
    
 0.914
bcd
379 aa, similar to sp:ACDS_CLOAB ACYL-COA DEHYDROGENASE, SHORT-CHAIN SPECIFIC (EC 1.3.99.2) (SCAD) (BUTYRYL-COA DEHYDROGENASE) from Clostridium acetobutylicum (379 aa); 72.6% identity in 379 aa overlap. 1 putative transmembrane region was found by PSORT; CPE2300.
    
 0.914
CPE2616
Hypothetical protein; 252 aa, partially similar to prf:2320383A thioesterase from Cuphea wrightii (398 aa); 20.8% identity in 226 aa overlap.
     
 0.913
CPE2617
Hypothetical protein; 246 aa, similar to gp:UCU17097_1 Uc FatB2 from Umbellularia californica (383 aa); 23.8% identity in 244 aa overlap.
     
 0.913
CPE0095
Crotonase; 258 aa, similar to gp:TTBCSOPRN_1 crotonase from Thermoanaerobacterium thermosaccharolyticum (259 aa); 58.9% identity in 253 aa overlap. (EC 4.2.1.55); 3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 
 0.908
crt
3-hydroxybutryl-CoA dehydratase; 260 aa, similar to sp:CRT_CLOAB 3-HYDROXYBUTYRYL-COA DEHYDRATASE (EC 4.2.1.55) (CROTONASE) from Clostridium acetobutylicum (261 aa); 68.8% identity in 260 aa overlap; CPE2301; crotonase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 
 0.908
adhE-2
865 aa, similar to pir:A49346 aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) / alcohol dehydrogenase (EC 1.1.1.1) E from Clostridium acetobutylicum (862 aa); 67.3% identity in 859 aa overlap. 1 putative transmembrane region was found by PSORT; CPE2531; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
     
 0.902
ptb
Phosphotransbutyrylase; 329 aa, similar to gp:AB035092_2 phosphotransbutyrylase from Clostridium perfringens (302 aa); 93% identity in 302 aa overlap. (EC 2.3.1.19); CPE2348.
     
  0.900
Your Current Organism:
Clostridium perfringens 13
NCBI taxonomy Id: 195102
Other names: C. perfringens str. 13, Clostridium perfringens str. 13
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