node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CPF_1518 | rlmH | CPF_1518 | CPF_2927 | RNA methyltransferase, TrmH family, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | Alpha/beta knot family protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | 0.496 |
CPF_1983 | rlmH | CPF_1983 | CPF_2927 | RNA methyltransferase, RsmD family; Identified by similarity to SP:P0ADY0; match to protein family HMM PF03602; match to protein family HMM TIGR00095. | Alpha/beta knot family protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | 0.622 |
CPF_1983 | sun | CPF_1983 | CPF_1994 | RNA methyltransferase, RsmD family; Identified by similarity to SP:P0ADY0; match to protein family HMM PF03602; match to protein family HMM TIGR00095. | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.526 |
CPF_2928 | CPF_2929 | CPF_2928 | CPF_2929 | Conserved hypothetical protein; Identified by similarity to GB:AAO75282.1. | Conserved hypothetical protein; Identified by similarity to PIR:C97100; match to protein family HMM PF06555. | 0.496 |
CPF_2928 | rlmH | CPF_2928 | CPF_2927 | Conserved hypothetical protein; Identified by similarity to GB:AAO75282.1. | Alpha/beta knot family protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | 0.424 |
CPF_2929 | CPF_2928 | CPF_2929 | CPF_2928 | Conserved hypothetical protein; Identified by similarity to PIR:C97100; match to protein family HMM PF06555. | Conserved hypothetical protein; Identified by similarity to GB:AAO75282.1. | 0.496 |
CPF_2929 | rlmH | CPF_2929 | CPF_2927 | Conserved hypothetical protein; Identified by similarity to PIR:C97100; match to protein family HMM PF06555. | Alpha/beta knot family protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | 0.467 |
ksgA | rlmH | CPF_2840 | CPF_2927 | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | Alpha/beta knot family protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | 0.440 |
ksgA | rsmI | CPF_2840 | CPF_0276 | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | Tetrapyrrole methylase family protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.412 |
ksgA | sun | CPF_2840 | CPF_1994 | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.603 |
ksgA | trmD | CPF_2840 | CPF_1963 | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.407 |
nadD | ribD | CPF_2380 | CPF_0546 | Nicotinate nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.686 |
nadD | rlmH | CPF_2380 | CPF_2927 | Nicotinate nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | Alpha/beta knot family protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | 0.483 |
ribD | nadD | CPF_0546 | CPF_2380 | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Nicotinate nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.686 |
ribD | rlmH | CPF_0546 | CPF_2927 | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Alpha/beta knot family protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | 0.569 |
ribD | sun | CPF_0546 | CPF_1994 | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.769 |
rlmH | CPF_1518 | CPF_2927 | CPF_1518 | Alpha/beta knot family protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | RNA methyltransferase, TrmH family, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | 0.496 |
rlmH | CPF_1983 | CPF_2927 | CPF_1983 | Alpha/beta knot family protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | RNA methyltransferase, RsmD family; Identified by similarity to SP:P0ADY0; match to protein family HMM PF03602; match to protein family HMM TIGR00095. | 0.622 |
rlmH | CPF_2928 | CPF_2927 | CPF_2928 | Alpha/beta knot family protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | Conserved hypothetical protein; Identified by similarity to GB:AAO75282.1. | 0.424 |
rlmH | CPF_2929 | CPF_2927 | CPF_2929 | Alpha/beta knot family protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | Conserved hypothetical protein; Identified by similarity to PIR:C97100; match to protein family HMM PF06555. | 0.467 |