node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CPF_2987 | CPF_2990 | CPF_2987 | CPF_2990 | Stage 0 sporulation protein J; Identified by similarity to SP:P26497; match to protein family HMM PF02195; match to protein family HMM TIGR00180; Belongs to the ParB family. | Hypothetical protein; Identified by glimmer; putative. | 0.402 |
CPF_2987 | CPF_2993 | CPF_2987 | CPF_2993 | Stage 0 sporulation protein J; Identified by similarity to SP:P26497; match to protein family HMM PF02195; match to protein family HMM TIGR00180; Belongs to the ParB family. | R3H domain protein; Identified by similarity to SP:Q01620; match to protein family HMM PF01424. | 0.509 |
CPF_2987 | gidA | CPF_2987 | CPF_2991 | Stage 0 sporulation protein J; Identified by similarity to SP:P26497; match to protein family HMM PF02195; match to protein family HMM TIGR00180; Belongs to the ParB family. | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | 0.611 |
CPF_2987 | gidB | CPF_2987 | CPF_2989 | Stage 0 sporulation protein J; Identified by similarity to SP:P26497; match to protein family HMM PF02195; match to protein family HMM TIGR00180; Belongs to the ParB family. | 16S rRNA methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. | 0.847 |
CPF_2987 | oxaA | CPF_2987 | CPF_2994 | Stage 0 sporulation protein J; Identified by similarity to SP:P26497; match to protein family HMM PF02195; match to protein family HMM TIGR00180; Belongs to the ParB family. | Membrane protein OxaA; Identified by match to protein family HMM PF02096; match to protein family HMM TIGR03592. | 0.533 |
CPF_2987 | rnpA | CPF_2987 | CPF_2996 | Stage 0 sporulation protein J; Identified by similarity to SP:P26497; match to protein family HMM PF02195; match to protein family HMM TIGR00180; Belongs to the ParB family. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.506 |
CPF_2987 | rpmH | CPF_2987 | CPF_2997 | Stage 0 sporulation protein J; Identified by similarity to SP:P26497; match to protein family HMM PF02195; match to protein family HMM TIGR00180; Belongs to the ParB family. | 50S ribosomal protein L34; Identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030; Belongs to the bacterial ribosomal protein bL34 family. | 0.431 |
CPF_2987 | soj | CPF_2987 | CPF_2988 | Stage 0 sporulation protein J; Identified by similarity to SP:P26497; match to protein family HMM PF02195; match to protein family HMM TIGR00180; Belongs to the ParB family. | Sporulation initiation inhibitor protein soj; Identified by match to protein family HMM PF01656. | 0.995 |
CPF_2987 | trmE | CPF_2987 | CPF_2992 | Stage 0 sporulation protein J; Identified by similarity to SP:P26497; match to protein family HMM PF02195; match to protein family HMM TIGR00180; Belongs to the ParB family. | tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.606 |
CPF_2990 | CPF_2987 | CPF_2990 | CPF_2987 | Hypothetical protein; Identified by glimmer; putative. | Stage 0 sporulation protein J; Identified by similarity to SP:P26497; match to protein family HMM PF02195; match to protein family HMM TIGR00180; Belongs to the ParB family. | 0.402 |
CPF_2990 | gidA | CPF_2990 | CPF_2991 | Hypothetical protein; Identified by glimmer; putative. | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | 0.682 |
CPF_2990 | gidB | CPF_2990 | CPF_2989 | Hypothetical protein; Identified by glimmer; putative. | 16S rRNA methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. | 0.727 |
CPF_2990 | soj | CPF_2990 | CPF_2988 | Hypothetical protein; Identified by glimmer; putative. | Sporulation initiation inhibitor protein soj; Identified by match to protein family HMM PF01656. | 0.402 |
CPF_2990 | trmE | CPF_2990 | CPF_2992 | Hypothetical protein; Identified by glimmer; putative. | tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.659 |
CPF_2993 | CPF_2987 | CPF_2993 | CPF_2987 | R3H domain protein; Identified by similarity to SP:Q01620; match to protein family HMM PF01424. | Stage 0 sporulation protein J; Identified by similarity to SP:P26497; match to protein family HMM PF02195; match to protein family HMM TIGR00180; Belongs to the ParB family. | 0.509 |
CPF_2993 | gidA | CPF_2993 | CPF_2991 | R3H domain protein; Identified by similarity to SP:Q01620; match to protein family HMM PF01424. | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | 0.587 |
CPF_2993 | gidB | CPF_2993 | CPF_2989 | R3H domain protein; Identified by similarity to SP:Q01620; match to protein family HMM PF01424. | 16S rRNA methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. | 0.786 |
CPF_2993 | oxaA | CPF_2993 | CPF_2994 | R3H domain protein; Identified by similarity to SP:Q01620; match to protein family HMM PF01424. | Membrane protein OxaA; Identified by match to protein family HMM PF02096; match to protein family HMM TIGR03592. | 0.909 |
CPF_2993 | rnpA | CPF_2993 | CPF_2996 | R3H domain protein; Identified by similarity to SP:Q01620; match to protein family HMM PF01424. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.889 |
CPF_2993 | rpmH | CPF_2993 | CPF_2997 | R3H domain protein; Identified by similarity to SP:Q01620; match to protein family HMM PF01424. | 50S ribosomal protein L34; Identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030; Belongs to the bacterial ribosomal protein bL34 family. | 0.671 |