STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN97_20175Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (337 aa)    
Predicted Functional Partners:
CN97_13920
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.844
CN97_20180
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.787
tolB
Translocation protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
   
 
 0.761
CN97_20190
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.753
CN97_04705
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.695
CN97_05550
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.692
CN97_12550
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.673
CN97_11940
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.671
CN97_07160
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.662
CN97_11640
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.660
Your Current Organism:
Haematobacter massiliensis
NCBI taxonomy Id: 195105
Other names: CCUG 47968, CIP 107725, H. massiliensis, Haematobacter massiliensis Heisel et al. 2007, Rhodobacter massiliensis, Rhodobacter massiliensis Greub and Raoult 2006, cf. Rhodobacter sp. Framboise, strain Framboise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.