STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
petJCytochrome c, mono- and diheme variants family; Functions as an electron carrier between membrane-bound cytochrome b6-f and photosystem I in oxygenic photosynthesis. (112 aa)    
Predicted Functional Partners:
psbV
Cytochrome c-550; Low-potential cytochrome c that plays a role in the oxygen- evolving complex of photosystem II.
   
 0.972
AFY61035.1
TIGRFAM: photosystem II cytochrome PsbV2.
 
   
 0.773
psbU
Photosystem II 12 kDa extrinsic protein (PsbU); Stabilizes the structure of photosystem II oxygen-evolving complex (OEC), the ion environment of oxygen evolution and protects the OEC against heat-induced inactivation.
  
   
 0.754
AFY61010.1
PFAM: Protein of unknown function (DUF2997).
  
     0.744
accD
acetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
 
      0.724
AFY59463.1
Putative integral membrane protein; PFAM: YGGT family.
  
     0.691
AFY62451.1
PFAM: Manganese-stabilising protein / photosystem II polypeptide.
  
   
 0.688
AFY61596.1
PFAM: Protein of unknown function (DUF3007).
  
     0.686
AFY60123.1
PFAM: Photosystem I reaction centre subunit III.
  
   
 0.679
psaE
Photosystem I reaction centre subunit IV / PsaE; Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase; Belongs to the PsaE family.
  
   
 0.669
Your Current Organism:
Synechococcus sp. PCC6312
NCBI taxonomy Id: 195253
Other names: S. sp. PCC 6312, Synechococcus sp. ATCC 27167, Synechococcus sp. PCC 6312
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