STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BD01_2124Methyl-accepting chemotaxis protein; COG0840. (742 aa)    
Predicted Functional Partners:
BD01_1157
Chemotaxis signal transduction protein; COG0835.
 
 0.998
BD01_1159
Methylase of chemotaxis methyl-accepting protein; COG1352.
 
 0.995
cheB
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 0.995
BD01_1162
Chemotaxis protein histidine kinase-related kinase; COG0643.
 
 
 0.993
cheD
Chemotaxis protein, stimulates methylation of MCP protein; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
 
 0.990
BD01_1160
CheY-like receiver; COG0784.
 
 0.989
BD01_1163
Chemotaxis protein CheC, inhibitor of MCP methylation; COG1776.
 
 
 0.807
BD01_1164
Chemotaxis protein CheC, inhibitor of MCP methylation; COG1776.
 
 
 0.751
BD01_2123
S1p family ribosomal protein.
       0.556
BD01_2122
Hypothetical protein.
       0.434
Your Current Organism:
Thermococcus nautili
NCBI taxonomy Id: 195522
Other names: CNCM 4275, JCM 19601, T. nautili, Thermococcus nautili Gorlas et al. 2014, Thermococcus nautilus, Thermococcus sp. 30-1, strain 30-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.