A0A482WSP2 protein (Laodelphax striatellus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A482WSP2

Uncharacterized protein. (1319 aa)

Predicted Functional Partners:

A0A482WGQ7

0.621

A0A482WJL7

0.621

A0A482WKB2

0.535

A0A482WP19

0.534

A0A482WPB6

0.534

A0A482WYS2

0.519

A0A482WR19

0.507

A0A482WLN2

0.499

A0A482X984

0.499

A0A482XMY3

0.499

Your Current Organism:

Laodelphax striatellus

NCBI taxonomy Id: 195883
Other names: L. striatellus, Laodelphax striatella, small brown planthopper

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A482WGQ7	A0A482WLN2	Uncharacterized protein.	Uncharacterized protein.	0.761
A0A482WGQ7	A0A482WSP2	Uncharacterized protein.	Uncharacterized protein.	0.621
A0A482WGQ7	A0A482X984	Uncharacterized protein.	Uncharacterized protein.	0.748
A0A482WGQ7	A0A482XMY3	Uncharacterized protein.	Uncharacterized protein.	0.748
A0A482WJL7	A0A482WLN2	Uncharacterized protein.	Uncharacterized protein.	0.744
A0A482WJL7	A0A482WSP2	Uncharacterized protein.	Uncharacterized protein.	0.621
A0A482WJL7	A0A482X984	Uncharacterized protein.	Uncharacterized protein.	0.742
A0A482WJL7	A0A482XMY3	Uncharacterized protein.	Uncharacterized protein.	0.742
A0A482WKB2	A0A482WSP2	GCM domain-containing protein.	Uncharacterized protein.	0.535
A0A482WLN2	A0A482WGQ7	Uncharacterized protein.	Uncharacterized protein.	0.761
A0A482WLN2	A0A482WJL7	Uncharacterized protein.	Uncharacterized protein.	0.744
A0A482WLN2	A0A482WSP2	Uncharacterized protein.	Uncharacterized protein.	0.499
A0A482WLN2	A0A482X984	Uncharacterized protein.	Uncharacterized protein.	0.651
A0A482WLN2	A0A482XMY3	Uncharacterized protein.	Uncharacterized protein.	0.925
A0A482WP19	A0A482WPB6	Uncharacterized protein.	Uncharacterized protein.	0.746
A0A482WP19	A0A482WSP2	Uncharacterized protein.	Uncharacterized protein.	0.534
A0A482WPB6	A0A482WP19	Uncharacterized protein.	Uncharacterized protein.	0.746
A0A482WPB6	A0A482WSP2	Uncharacterized protein.	Uncharacterized protein.	0.534
A0A482WR19	A0A482WSP2	Uncharacterized protein.	Uncharacterized protein.	0.507
A0A482WSP2	A0A482WGQ7	Uncharacterized protein.	Uncharacterized protein.	0.621