A0A482XGH9 protein (Laodelphax striatellus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A482XGH9

PAW domain-containing protein. (652 aa)

Predicted Functional Partners:

A0A482XKD9

0.996

A0A482XDK9

0.965

A0A482XJQ7

0.965

A0A482XKV7

0.965

A0A482X813

0.872

A0A482WNS4

0.868

A0A482XAY7

0.858

A0A482WEQ8

0.847

A0A482WV97

0.829

A0A482WWW2

0.829

Your Current Organism:

Laodelphax striatellus

NCBI taxonomy Id: 195883
Other names: L. striatellus, Laodelphax striatella, small brown planthopper

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A482WEQ8	A0A482WNS4	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.981
A0A482WEQ8	A0A482WV97	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.707
A0A482WEQ8	A0A482WWW2	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.707
A0A482WEQ8	A0A482X813	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.610
A0A482WEQ8	A0A482XAY7	Ubiquitin-like domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.951
A0A482WEQ8	A0A482XDK9	Ubiquitin-like domain-containing protein.	ATPase_AAA_core domain-containing protein.	0.933
A0A482WEQ8	A0A482XGH9	Ubiquitin-like domain-containing protein.	PAW domain-containing protein.	0.847
A0A482WEQ8	A0A482XJQ7	Ubiquitin-like domain-containing protein.	AAA_lid_3 domain-containing protein.	0.933
A0A482WEQ8	A0A482XKD9	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.974
A0A482WEQ8	A0A482XKV7	Ubiquitin-like domain-containing protein.	LisH domain-containing protein.	0.933
A0A482WNS4	A0A482WEQ8	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.981
A0A482WNS4	A0A482WV97	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.959
A0A482WNS4	A0A482WWW2	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.960
A0A482WNS4	A0A482X813	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.998
A0A482WNS4	A0A482XAY7	Ubiquitin-like domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.985
A0A482WNS4	A0A482XDK9	Ubiquitin-like domain-containing protein.	ATPase_AAA_core domain-containing protein.	0.933
A0A482WNS4	A0A482XGH9	Ubiquitin-like domain-containing protein.	PAW domain-containing protein.	0.868
A0A482WNS4	A0A482XJQ7	Ubiquitin-like domain-containing protein.	AAA_lid_3 domain-containing protein.	0.933
A0A482WNS4	A0A482XKD9	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.973
A0A482WNS4	A0A482XKV7	Ubiquitin-like domain-containing protein.	LisH domain-containing protein.	0.933