STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMN03159343_2695Uncharacterized protein. (354 aa)    
Predicted Functional Partners:
SAMN03159343_2696
O(6)-alkylguanine repair protein YbaZ.
       0.697
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
 0.684
SAMN03159343_2697
Superfamily I DNA or RNA helicase; Belongs to the helicase family. UvrD subfamily.
    
  0.576
SAMN03159343_2698
DNA helicase-2 / ATP-dependent DNA helicase PcrA; Belongs to the helicase family. UvrD subfamily.
    
  0.576
SAMN03159343_2694
TIGR03086 family protein.
       0.542
SAMN03159343_1429
Serine/threonine protein phosphatase PrpC.
  
  0.531
SAMN03159343_3829
Protein phosphatase.
  
  0.531
SAMN03159343_3043
Signal transduction histidine kinase.
    
 0.527
SAMN03159343_2672
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
   
 
 0.458
SAMN03159343_3102
Zinc-ribbon domain-containing protein.
   
 
 0.451
Your Current Organism:
Klenkia marina
NCBI taxonomy Id: 1960309
Other names: Actinobacteria bacterium DSM 45722, CCTCC AB 2012057, CCTCC:AB:2012057, DSM 45722, Geodermatophilus sp. YIM M1316, K. marina, Klenkia marina Montero-Calasanz et al. 2018, YIM M13156
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.