STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQY88416.1DNA mismatch repair protein MutS. (858 aa)    
Predicted Functional Partners:
OQY88972.1
Hypothetical protein.
 
 0.999
OQY90246.1
DNA polymerase III subunit beta.
   
 0.997
OQY87333.1
DNA polymerase I.
  
 0.997
OQY88613.1
Hypothetical protein.
  
 0.942
OQY91064.1
asparagine--tRNA ligase.
   
 0.938
OQY91258.1
Excinuclease ABC subunit C.
 
  
 0.926
OQY90657.1
RNA helicase.
   
 0.922
OQY90057.1
Hypothetical protein.
   
 0.922
OQY87625.1
Hypothetical protein.
 
 
0.915
OQY89623.1
Restriction endonuclease subunit R.
   
 0.902
Your Current Organism:
Anaerolineae bacterium UTCFX1
NCBI taxonomy Id: 1961100
Other names: A. bacterium UTCFX1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.