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Noca_0003 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0003" - 6-phosphogluconate dehydrogenase in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_00036-phosphogluconate dehydrogenase (301 aa)    
Predicted Functional Partners:
Noca_3722
Gluconate kinase (160 aa)
     
  0.996
Noca_2536
6-phosphogluconolactonase (241 aa)
 
   
  0.985
Noca_3483
Ribose-5-phosphate isomerase B (162 aa)
       
  0.963
Noca_2446
Ribulose-phosphate 3-epimerase (220 aa)
         
  0.962
Noca_2538
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone (516 aa)
 
   
  0.894
Noca_4526
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone (482 aa)
 
   
  0.891
Noca_0005
Hypothetical protein (188 aa)
              0.854
recF
Recombination protein F; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP (420 aa)
              0.854
Noca_4198
Short-chain dehydrogenase/reductase SDR (263 aa)
         
  0.812
araB
Ribulokinase (567 aa)
         
    0.800
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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