STRINGSTRING
Noca_0015 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0015" - Phospholipid/glycerol acyltransferase in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0015Phospholipid/glycerol acyltransferase (339 aa)    
Predicted Functional Partners:
Noca_0014
Patatin (290 aa)
              0.912
Noca_0013
Hypothetical protein (115 aa)
              0.756
Noca_0012
Hypothetical protein (270 aa)
              0.744
Noca_0011
GntR family transcriptional regulator (249 aa)
              0.573
Noca_0010
Fatty acid hydroxylase (246 aa)
              0.573
Noca_4645
Patatin (310 aa)
              0.400
Noca_4504
Patatin (293 aa)
              0.400
Noca_2085
Patatin (314 aa)
              0.400
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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