STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0015PFAM: phospholipid/glycerol acyltransferase; KEGG: fal:FRAAL0743 hypothetical protein; putative signal peptide; putative acyltransferase domain. (339 aa)    
Predicted Functional Partners:
Noca_0014
PFAM: Patatin; KEGG: fal:FRAAL0742 hypothetical protein.
 
     0.949
Noca_0012
KEGG: tfu:Tfu_0164 hypothetical protein.
   
 
 0.709
Noca_0013
KEGG: sma:SAV2833 hypothetical protein.
       0.691
Noca_2606
KEGG: rha:RHA1_ro05489 hypothetical protein.
  
     0.600
Noca_4645
PFAM: Patatin; KEGG: rha:RHA1_ro01898 possible lipid acyl hydrolase.
 
     0.592
Noca_2085
PFAM: Patatin; KEGG: rha:RHA1_ro01898 possible lipid acyl hydrolase.
 
     0.540
Noca_0010
PFAM: fatty acid hydroxylase; KEGG: mmc:Mmcs_2728 fatty acid hydroxylase.
     
 0.519
Noca_1656
Aminotransferase; PFAM: class II aldolase/adducin family protein; aminotransferase class-III; KEGG: psp:PSPPH_2738 glutamate-1-semialdehyde aminotransferase.
 
     0.509
Noca_0011
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: mmc:Mmcs_2727 regulatory protein GntR, HTH.
     
 0.505
Noca_0753
PFAM: flagellar hook-length control protein; KEGG: lma:LmjF35.0290 hypothetical protein, conserved.
  
     0.495
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.