STRINGSTRING
Noca_0026 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0026" - Protein phosphatase 2C domain-containing protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0026Protein phosphatase 2C domain-containing protein (438 aa)    
Predicted Functional Partners:
Noca_0022
Protein kinase (597 aa)
  0.996
Noca_0023
Protein kinase (481 aa)
  0.996
Noca_3086
Protein kinase (658 aa)
  0.988
Noca_3705
Protein kinase (449 aa)
  0.974
Noca_0025
Cell cycle protein (468 aa)
 
   
  0.966
Noca_4665
Protein kinase (307 aa)
  0.964
Noca_4496
Protein kinase (488 aa)
  0.964
Noca_3365
Protein kinase (545 aa)
  0.964
Noca_2005
Protein kinase (283 aa)
  0.964
Noca_1978
Protein kinase (482 aa)
  0.964
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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