STRINGSTRING
Noca_0030 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0030" - Major facilitator transporter in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0030Major facilitator transporter (402 aa)    
Predicted Functional Partners:
Noca_2075
Cytochrome c biogenesis protein, transmembrane region (297 aa)
   
          0.640
Noca_0032
Fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein (532 aa)
              0.615
Noca_0031
Dehydratase (160 aa)
              0.615
Noca_0034
Hydroxyglutarate oxidase (408 aa)
              0.573
Noca_0033
Dihydrodipicolinate synthetase (305 aa)
              0.573
Noca_4084
Cyclase family protein (280 aa)
   
          0.562
Noca_3967
Carbon monoxide dehydrogenase subunit G (246 aa)
   
          0.551
Noca_0593
Carbon monoxide dehydrogenase subunit G (244 aa)
   
          0.529
Noca_0232
Carbon monoxide dehydrogenase subunit G (198 aa)
   
          0.517
Noca_4085
MmgE/PrpD family protein (476 aa)
   
          0.511
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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