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Noca_0040 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0040" - MmgE/PrpD family protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0040MmgE/PrpD family protein (453 aa)    
Predicted Functional Partners:
Noca_0888
Citrate synthase (447 aa)
   
  0.986
Noca_2876
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis-aconitate (938 aa)
   
 
  0.956
Noca_0733
Citrate synthase 2 (368 aa)
   
  0.869
Noca_0204
2,3-dimethylmalate lyase (325 aa)
 
 
  0.826
Noca_2035
Hypothetical protein (255 aa)
 
 
  0.786
Noca_4079
HpcH/HpaI aldolase (283 aa)
 
        0.727
Noca_4084
Cyclase family protein (280 aa)
 
          0.661
Noca_0039
formyl-CoA transferase (406 aa)
   
        0.658
Noca_0041
Extracellular solute-binding protein (460 aa)
              0.644
Noca_4394
citryl-CoA lyase (292 aa)
 
        0.611
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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