STRINGSTRING
Noca_0051 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0051" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0051Hypothetical protein (280 aa)    
Predicted Functional Partners:
Noca_4018
ABC-type branched-chain amino acid transport systems periplasmic component-like (481 aa)
   
          0.727
Noca_1581
Hypothetical protein (334 aa)
   
          0.609
Noca_2258
Hypothetical protein (334 aa)
   
          0.589
Noca_3836
Alpha/beta hydrolase fold protein (298 aa)
   
          0.569
Noca_2280
Type III restriction enzyme, res subunit (558 aa)
   
          0.554
Noca_1442
Hypothetical protein (212 aa)
   
          0.525
Noca_0050
Dyp-type peroxidase family protein (481 aa)
 
          0.494
Noca_2830
PA-phosphatase-like phosphoesterase (229 aa)
   
          0.454
Noca_0052
Hypothetical protein (177 aa)
              0.445
Noca_2941
Hypothetical protein (410 aa)
   
          0.432
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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