STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0082PFAM: FAD dependent oxidoreductase; KEGG: sma:SAV1734 oxidoreductase. (393 aa)    
Predicted Functional Partners:
Noca_0084
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sco:SCO6291 secreted oxidase.
  
  0.995
Noca_0085
PFAM: dihydrodipicolinate synthetase; KEGG: sma:SAV1731 putative dihydrodipicolinate synthase; Belongs to the DapA family.
 
  
 0.994
Noca_0083
KEGG: sma:SAV1733 hypothetical protein.
 
    0.951
Noca_0690
Dihydrodipicolinate synthase/N-acetylneuraminate lyase-like protein; KEGG: jan:Jann_1453 dihydrodipicolinate synthetase.
    
 0.905
Noca_0086
PFAM: aldehyde dehydrogenase; KEGG: rha:RHA1_ro02898 aldehyde dehydrogenase (NADP+).
 
  
 0.904
Noca_1780
D-amino-acid:oxygen oxidoreductase (deaminating); PFAM: FAD dependent oxidoreductase; KEGG: rxy:Rxyl_0526 D-amino acid oxidase.
     
  0.900
Noca_3403
Thiazole-phosphate synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
 
  
 0.815
Noca_0081
PFAM: peptidase M19, renal dipeptidase; KEGG: mlo:mlr6286 similar to dipeptidase.
 
    0.811
Noca_0079
5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: mta:Moth_1967 5-oxoprolinase (ATP-hydrolyzing).
 
    0.810
Noca_0080
5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase B/oxoprolinase; KEGG: gka:GK2893 N-methylhydantoinase B (ATP-hydrolyzing).
 
     0.810
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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