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Noca_0120 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0120" - Daunorubicin resistance ABC transporter ATPase subunit in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0120Daunorubicin resistance ABC transporter ATPase subunit (338 aa)    
Predicted Functional Partners:
Noca_0121
ABC transporter (252 aa)
 
  0.992
Noca_1483
ABC transporter (269 aa)
  0.932
Noca_2544
ABC transporter (265 aa)
   
  0.786
Noca_0479
ABC transporter (245 aa)
 
  0.786
Noca_0117
PadR family transcriptional regulator (204 aa)
 
          0.643
Noca_2543
Cytochrome oxidase assembly (305 aa)
       
    0.616
Noca_2200
Cytochrome c assembly protein (327 aa)
       
  0.583
Noca_1955
Cytochrome c assembly protein (254 aa)
       
  0.583
Noca_0504
Cytochrome c assembly protein (341 aa)
       
  0.583
Noca_1953
Cytochrome c-type biogenesis protein CcmB (220 aa)
       
    0.578
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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