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Noca_0157 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0157" - Bifunctional DNA-(apurinic or apyrimidinic site) lyase/formamidopyrimidine-DNA glycosylase in Nocardioides sp. JS614
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second shell of interactors
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
Noca_0157Bifunctional DNA-(apurinic or apyrimidinic site) lyase/formamidopyrimidine-DNA glycosylase (288 aa)    
Predicted Functional Partners:
Noca_3006
DNA polymerase I (889 aa)
   
   
  0.868
fpg
formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3’- and 5’-phosphates (295 aa)
   
   
0.853
Noca_0156
Rhodanese domain-containing protein (111 aa)
              0.775
Noca_2328
formamidopyrimidine-DNA glycosylase (268 aa)
   
          0.736
Noca_2659
5’-3’ exonuclease (301 aa)
 
   
  0.687
coaD
Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4’- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate (159 aa)
   
 
  0.637
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3’-hydroxyl group of dephosphocoenzyme A to form coenzyme A (196 aa)
 
   
  0.627
Noca_0158
Hypothetical protein (140 aa)
              0.602
Noca_0907
ATP-dependent DNA ligase (366 aa)
   
   
  0.565
Noca_2842
5’-3’ exonuclease (289 aa)
   
   
  0.545
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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