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Noca_0162 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0162" - SecC motif-containing protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0162SecC motif-containing protein (312 aa)    
Predicted Functional Partners:
Noca_0161
Glycerophosphoryl diester phosphodiesterase (265 aa)
              0.898
Noca_0160
methylmalonyl-CoA epimerase (122 aa)
              0.840
Noca_3818
Integral membrane protein (315 aa)
   
          0.675
Noca_2636
Hypothetical protein (299 aa)
   
          0.669
Noca_1529
Hypothetical protein (202 aa)
   
          0.663
Noca_2990
Type 11 methyltransferase (269 aa)
   
          0.621
Noca_3931
Major facilitator transporter (449 aa)
   
          0.610
Noca_0159
Hypothetical protein (400 aa)
              0.555
Noca_2684
Hypothetical protein (245 aa)
   
          0.546
Noca_4049
Hypothetical protein (199 aa)
   
          0.533
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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