STRINGSTRING
Noca_0165 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0165" - Cyclic nucleotide-binding protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0165Cyclic nucleotide-binding protein (124 aa)    
Predicted Functional Partners:
Noca_4019
Metallophosphoesterase (480 aa)
   
          0.733
Noca_0164
Adenylyl cyclase class-3/4/guanylyl cyclase (371 aa)
              0.695
Noca_1468
ErfK/YbiS/YcfS/YnhG family protein (234 aa)
   
          0.677
Noca_0163
Hypothetical protein (284 aa)
              0.631
Noca_3586
Hypothetical protein (609 aa)
   
          0.625
Noca_0166
Arginine deiminase (407 aa)
              0.607
Noca_3369
Cytidine/deoxycytidylate deaminase/NUDIX/methyltransferase domain-containing protein (188 aa)
   
          0.578
Noca_0927
Hypothetical protein (341 aa)
   
          0.571
Noca_1441
Hypothetical protein (172 aa)
   
          0.555
Noca_0795
Hypothetical protein (272 aa)
   
          0.548
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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