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Noca_0169 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0169" - Circadian phase modifier CpmA in Nocardioides sp. JS614
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0169Circadian phase modifier CpmA (228 aa)    
Predicted Functional Partners:
Noca_0168
Hypothetical protein (393 aa)
          0.971
Noca_3933
Hydrolase (472 aa)
 
     
  0.880
Noca_0167
Hypothetical protein (196 aa)
              0.862
Noca_0166
Arginine deiminase (407 aa)
              0.745
purC
Phosphoribosylaminoimidazole-succinocarboxamide synthase (284 aa)
       
  0.554
Noca_1327
Cobalamin (vitamin B12) biosynthesis protein CbiM (229 aa)
 
          0.532
Noca_0165
Cyclic nucleotide-binding protein (124 aa)
              0.526
Noca_0170
Prephenate dehydratase (287 aa)
              0.525
Noca_3107
LOR/SDH bifunctional protein (435 aa)
 
          0.478
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP (527 aa)
              0.453
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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