STRINGSTRING
Noca_0175 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0175" - HAD family hydrolase in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0175HAD family hydrolase (282 aa)    
Predicted Functional Partners:
serS
seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) (424 aa)
   
   
  0.914
Noca_0177
HAD family hydrolase (264 aa)
 
       
0.895
Noca_0176
N-acetyltransferase GCN5 (165 aa)
              0.859
Noca_0178
Hypothetical protein (203 aa)
              0.845
Noca_2539
Glucose-6-phosphate isomerase (555 aa)
 
 
  0.771
Noca_2447
Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate (345 aa)
   
 
    0.741
Noca_1209
O-methyltransferase family protein (165 aa)
 
      0.740
Noca_1427
Hypothetical protein (342 aa)
   
 
  0.723
Noca_0173
PA-phosphatase-like phosphoesterase (506 aa)
              0.720
Noca_4202
Mannose-6-phosphate isomerase (412 aa)
 
 
  0.716
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (8%) [HD]