STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0193KEGG: rxy:Rxyl_3061 hypothetical protein. (228 aa)    
Predicted Functional Partners:
Noca_3038
KEGG: dsy:DSY4470 hypothetical protein.
 
     0.634
Noca_3036
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dsy:DSY4468 hypothetical protein.
 
     0.540
Noca_2314
Flavodoxin-like protein; KEGG: tfu:Tfu_3023 similar to flavodoxin.
 
     0.527
Noca_0194
PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: sth:STH749 two-component sensor kinase, probably involved in phosphate sensing.
       0.512
Noca_0192
Phosphate ABC transporter substrate-binding protein, PhoT family; TIGRFAM: phosphate binding protein; KEGG: tth:TTC1726 phosphate-binding protein; TC 3.A.1.7.1.
       0.472
Noca_3037
PFAM: DsrC family protein; KEGG: mta:Moth_1632 DsrC-like protein.
 
     0.441
Noca_3353
KEGG: rha:RHA1_ro04235 possible membrane protein.
  
     0.406
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.