STRINGSTRING
Noca_0213 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0213" - Superfamily I DNA and RNA helicase in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0213Superfamily I DNA and RNA helicase (717 aa)    
Predicted Functional Partners:
Noca_4482
Hypothetical protein (389 aa)
   
          0.600
Noca_1471
Integral membrane protein (100 aa)
   
          0.526
Noca_2801
Hypothetical protein (73 aa)
   
          0.517
Noca_3078
Hypothetical protein (143 aa)
   
          0.499
Noca_2309
Hypothetical protein (515 aa)
   
          0.499
Noca_0013
Hypothetical protein (115 aa)
   
          0.497
Noca_2098
TetR family transcriptional regulator (199 aa)
   
          0.479
Noca_4041
Hypothetical protein (290 aa)
   
          0.478
Noca_4657
DnaB domain-containing protein; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity (824 aa)
   
          0.475
Noca_0117
PadR family transcriptional regulator (204 aa)
   
          0.467
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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