STRINGSTRING
Noca_0239 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0239" - ATPase in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0239ATPase (291 aa)    
Predicted Functional Partners:
Noca_0238
VWA containing CoxE family protein (375 aa)
 
   
    0.988
Noca_3974
VWA containing CoxE family protein (370 aa)
 
   
    0.915
Noca_0292
VWA containing CoxE family protein (455 aa)
 
 
    0.914
Noca_0237
Hypothetical protein (150 aa)
              0.856
Noca_1634
Xanthine dehydrogenase, molybdenum binding subunit apoprotein (972 aa)
       
  0.838
Noca_3969
Xanthine dehydrogenase, molybdenum binding subunit apoprotein (835 aa)
 
   
  0.809
Noca_0240
Hypothetical protein (80 aa)
              0.787
Noca_0224
Carbon monoxide dehydrogenase, large subunit (791 aa)
 
   
  0.772
Noca_1492
Carbon monoxide dehydrogenase subunit G (216 aa)
 
 
    0.770
Noca_0596
Xanthine dehydrogenase, molybdenum binding subunit apoprotein (801 aa)
 
   
  0.753
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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