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Noca_0242 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0242" - Regulatory protein TetR in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0242Regulatory protein TetR (188 aa)    
Predicted Functional Partners:
Noca_0241
acyl-CoA dehydrogenase domain-containing protein (389 aa)
 
          0.801
Noca_0243
Reduced coenzyme F420-NADP oxidoreductase (225 aa)
              0.679
Noca_3002
Polysaccharide biosynthesis protein (435 aa)
   
          0.611
Noca_4416
Hypothetical protein (213 aa)
   
          0.565
Noca_3326
PilT domain-containing protein (143 aa)
   
          0.521
Noca_0795
Hypothetical protein (272 aa)
   
          0.518
Noca_4490
GDSL family lipase (299 aa)
   
          0.516
Noca_3169
Hypothetical protein (198 aa)
   
          0.496
Noca_4229
Hypothetical protein (98 aa)
   
          0.473
Noca_0604
Sugar ABC transporter periplasmic component-like protein (391 aa)
   
          0.470
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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