STRINGSTRING
Noca_0245 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0245" - Hexapaptide repeat-containing transferase in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0245Hexapaptide repeat-containing transferase (227 aa)    
Predicted Functional Partners:
Noca_2574
Phosphoserine phosphatase (420 aa)
 
   
    0.785
Noca_4185
Lipopolysaccharide biosynthesis protein (473 aa)
   
   
  0.672
Noca_0246
Hypothetical protein (167 aa)
              0.652
Noca_0904
Group 1 glycosyl transferase (890 aa)
 
   
  0.651
Noca_2799
Group 1 glycosyl transferase (421 aa)
 
   
  0.650
lgt
Prolipoprotein diacylglyceryl transferase; Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins (314 aa)
 
   
  0.620
Noca_1563
Group 1 glycosyl transferase (743 aa)
 
   
  0.609
Noca_0456
Glycosyl transferase family protein (370 aa)
 
   
  0.572
Noca_3992
Oxidoreductase domain-containing protein (336 aa)
 
   
  0.565
Noca_4220
DegT/DnrJ/EryC1/StrS aminotransferase (369 aa)
   
 
  0.563
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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