STRINGSTRING
Noca_0255 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0255" - Major facilitator transporter in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0255Major facilitator transporter (440 aa)    
Predicted Functional Partners:
Noca_0256
Hypothetical protein (485 aa)
              0.666
Noca_0257
Hypothetical protein (147 aa)
              0.575
Noca_4022
Hypothetical protein (398 aa)
   
          0.553
Noca_4587
Beta-glucosidase (465 aa)
 
          0.477
Noca_0258
1,4-dihydroxy-2-naphthoate synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) (305 aa)
              0.450
Noca_4594
Hypothetical protein (187 aa)
   
          0.424
Noca_0197
Alpha amylase catalytic subunit (925 aa)
   
          0.419
Noca_0182
Molybdopterin-guanine dinucleotide biosynthesis protein (205 aa)
   
          0.415
Noca_4625
CdaR family transcriptional regulator (535 aa)
   
          0.412
Noca_2494
Hypothetical protein (115 aa)
   
          0.412
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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