STRINGSTRING
Noca_0270 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0270" - Major facilitator transporter in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0270Major facilitator transporter (497 aa)    
Predicted Functional Partners:
Noca_0271
acyl-CoA dehydrogenase domain-containing protein (381 aa)
   
        0.778
Noca_0269
Glycogen debranching protein GlgX (733 aa)
              0.614
Noca_0268
Maltooligosyl trehalose synthase (749 aa)
              0.614
Noca_0267
Malto-oligosyltrehalose trehalohydrolase (579 aa)
              0.614
Noca_0272
Hypothetical protein (243 aa)
              0.572
Noca_4245
Regulatory protein TetR (221 aa)
 
          0.484
Noca_4170
MarR family transcriptional regulator (147 aa)
         
  0.442
Noca_3927
Regulatory protein MarR (156 aa)
         
  0.442
Noca_3374
MarR family transcriptional regulator (159 aa)
         
  0.442
Noca_2051
Regulatory protein MarR (164 aa)
         
  0.442
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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