STRINGSTRING
Noca_0272 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0272" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0272Hypothetical protein (243 aa)    
Predicted Functional Partners:
Noca_0271
acyl-CoA dehydrogenase domain-containing protein (381 aa)
              0.639
Noca_0270
Major facilitator transporter (497 aa)
              0.572
Noca_0273
2’-5’ RNA ligase; Hydrolyzes RNA 2’,3’-cyclic phosphodiester to an RNA 2’- phosphomonoester (188 aa)
              0.504
Noca_2216
Cation diffusion facilitator family transporter (305 aa)
 
 
  0.465
Noca_0269
Glycogen debranching protein GlgX (733 aa)
              0.441
Noca_3022
Glutamate synthase (NADH) large subunit (1519 aa)
   
   
  0.439
Noca_0267
Malto-oligosyltrehalose trehalohydrolase (579 aa)
              0.431
Noca_0268
Maltooligosyl trehalose synthase (749 aa)
              0.425
Noca_2056
Cation efflux protein (212 aa)
 
 
  0.418
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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