STRINGSTRING
Noca_0283 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0283" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0283Hypothetical protein (109 aa)    
Predicted Functional Partners:
Noca_0284
Signal-transduction protein (68 aa)
   
          0.740
Noca_0285
Putative DNA-binding protein (68 aa)
   
          0.644
Noca_0282
Hypothetical protein (289 aa)
              0.601
Noca_2411
Peptidase A24A, prepilin type IV (242 aa)
   
          0.569
Noca_2142
Hypothetical protein (352 aa)
   
          0.557
Noca_3549
Integral membrane protein (277 aa)
   
          0.521
Noca_2266
Hypothetical protein (313 aa)
   
          0.453
Noca_0472
Type 11 methyltransferase (251 aa)
   
          0.441
Noca_0566
Hypothetical protein (75 aa)
   
          0.411
Noca_3547
Fumarate reductase iron-sulfur subunit (258 aa)
   
          0.405
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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