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Noca_0295 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0295" - Aspartate aminotransferase in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0295Aspartate aminotransferase (393 aa)    
Predicted Functional Partners:
Noca_0321
Aspartate kinase (424 aa)
   
  0.973
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate (328 aa)
   
 
  0.967
Noca_0462
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate (575 aa)
       
  0.961
Noca_3022
Glutamate synthase (NADH) large subunit (1519 aa)
   
  0.937
Noca_1744
Homoserine dehydrogenase (441 aa)
 
  0.883
Noca_0170
Prephenate dehydratase (287 aa)
 
  0.858
Noca_2500
Prephenate dehydrogenase (361 aa)
       
  0.800
Noca_4174
FAD linked oxidase domain-containing protein (1000 aa)
   
  0.799
Noca_0725
FAD linked oxidase domain-containing protein (906 aa)
   
  0.799
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan (279 aa)
       
  0.786
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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